SELECTED PUBLICATIONS

The full list of Publications from Cosma group can be found at: http://scholar.google.es/citations?user=wz5H2vwAAAAJ&hl=en

Latest Publications

Neguembor MV, Arcon JP, Buitrago D, Lema R, Walther J, Garate X, Martin L, Romero P, AlHaj Abed J, Gut M, Blanc J, Lakadamyali M, Wu CT, Brun Heath I, Orozco M, Dans PD, Cosma MP. MiOS, an integrated imaging and computational strategy to model gene folding with nucleosome resolution. Nature Structural & Molecular Biology 2022 October 11 ;29(10):1011-1023

Sergi Àngel Bonilla-Pons, Shoma Nakagawa, Elena Garreta Bahima, Álvaro Fernández-Blanco, Martina Pesaresi, Justin Christopher D’Antin, Ruben Sebastian-Perez, Daniela Greco, Eduardo Domínguez-Sala, Raúl Gómez-Riera, Rafael Ignacio Barraquer Compte, Mara Dierssen, Nuria Montserrat Pulido, Maria Pia Cosma. Müller glia fused with adult stem cells undergo neural differentiation in human retinal models. EBioMedicine 2022 Mar 9;77:103914

Alvaro Castells-Garcia, Ilyas Ed-daoui, Esther González-Almela, Chiara Vicario, Jason Ottestrom, Melike Lakadamyali, Maria Victoria Neguembor, Maria Pia Cosma (2022). Super resolution microscopy reveals how elongating RNA polymerase II and nascent RNA interact with nucleosome clutches. Nucleic Acids Research, 2022 Jan 11;50(1):175-190

Neguembor, MV, Martin L, Castells-García A, Gómez-García, PA, Vicario, C, Carnevali, D, AlHaj Abed, J, Granados, A, Sebastian-Perez, R, Sottile, F, Solon, J, Wu, CT, Lakadamyali, L, and Cosma MP (2021). Transcription-mediated supercoling regulates genome folding and loop formation. Molecular Cell, Aug 5;81(15):3065-3081.e12. Epub 2021 Jul 22.

Gomez‐Garcia PA, Portillo‐Ledesma S, Neguembor MV, Pesaresi M, Oweis W, Rohrlich T, Wieser S, Meshorer E, Schlick T, *Cosma MP, and *Lakadamyali M. Mesoscale modeling and single nucleosome tracking reveal remodeling of clutch folding and dynamics in stem cell differentiation. Cell Reports 2021 Jan 12th *co-last authors

Pesaresi M, Bonilla SA, Sebastian R, Di Vicino U, Alcoverro M, Michael R, Cosma MP. The Chemokine Receptors Ccr5 and Cxcr6 Enhance Migration of Mesenchymal Stem Cells into the Degenerating Retina. Molecular Therapy 2021 Feb3rd

Arumugam K, Shin W, Schiavone V, Vlahos L, Tu X, Carnevali D, Kesner J, Paull EO, Romo N, Subramaniam P, Worley J, Tan X, Califano A, Cosma MP. The Master Regulator Protein BAZ2B Can Reprogram Human Hematopoietic Lineage-Committed Progenitors into a Multipotent State. Cell Reports 2020 December 8th

Neguembor MV, Sebastian-Perez R, Aulicino F, Gomez-Garcia PA, *Cosma MP, *Lakadamyali M (2017). (Po)STAC (Polycistronic SunTAg modified CRISPR) enables live-cell and fixed-cell super-resolution imaging of multiple genes. Nucleic Acids Research; *co-last authors

Theka I, Sottile F, Aulicino F, Castells Garcia A  and Cosma MP (2017). Reduced expression of Paternally Expressed Gene-3 enhances somatic cell reprogramming through mitochondrial activity perturbation, Scientific Reports.

Ricci MA, *Cosma MP and *Lakadamyali M (2017). Super Resolution imaging of chromatin in pluripotency, differentiation, and reprogramming. Current Opinion in Genetics and Development, in press; *co-last authors

De Jaime-Soguero A, Aulicino F, Ertaylan G,  Grieco A, Cerrato A, Tallam A, del Sol A,  *Cosma MP and *Lluis F and (2017). Wnt/b-catenin/Tcf1 pathway controls mouse embryonic stem cell cycle progression and proliferation by regulating the Ink4/Arf locus. Plos Genetics *co-last authors

Pedone E, Olteanu VA, Marucci L, Muñoz-Martin MI, Youssef SA, de Bruin A, Cosma MP (2017).Modeling Dynamics and Function of Bone Marrow Cells in Mouse Liver Regeneration. Cell Reports. 2017 Jan 3;18(1):107-121

Sottile F, Aulicino F, Theka I, Cosma MP (2016). Mesenchymal stem cells generate distinct functional hybrids in vitro via cell fusion or entosis.Scientific Reports, 2016 Nov 9;6:36863

Sanges D, Simonte G, Di Vicino U, Romo N, Pinilla I, Nicolás M, and Cosma MP (2016). Reprogramming Müller glia via in vivo cell fusion regenerates murine photoreceptors. Journal Clinical Investigation, Aug 1;126(8):3104-3116

Altarche-Xifro W, di Vicino U, Muñoz-Martin MI, Bové J, Vila M and Cosma MP (2016). Functional rescue of dopaminergic neuron loss in Parkinson’s disease mice after transplantation of hematopoietic stem and progenitor cells. EBioMedicine, Jun;8:83-95

Ricci MA, Manzo C, García-Parajo M, *Lakadamyali M, and *Cosma MP (2015). Chromatin fibers are formed by heterogeneous groups of nucleosomes in vivo. Cell, *co-last authors. Nominated F1000Prime 2015 https://www.youtube.com/watch?v=5KSr-giy8qo

Marucci L, Pedone E, Di Vicino U, Isalan M, Cosma MP (2014). beta-catenin and Nanog fluctuate synchronously in mouse ESCs and cooperate to enhance reprogramming of somatic cells to pluripotency. Cell Reports, Sep 25;8(6):1686-96.

Aulicino F, Theka I, Ombrato L, Lluis F, Cosma MP (2014) Temporal perturbation of the Wnt signalling pathway controls cell reprogramming via Tcf1 activity. Stem Cell Reports, May 8;2(5):707-20.

Sanges D, Romo N, Simonte G, Di Vicino U, Tahoces AD, Fernández E, Cosma MP. (2013) Wnt/β-Catenin Signaling Triggers Neuron Reprogramming and Regeneration in the Mouse Retina. Cell Reports Jul 25;4(2):271-86.

Lluis F, Ombrato L, Pedone E, Pepe S, Merrill BJ, Cosma MP. (2011) T-cell factor 3 (Tcf3) deletion increases somatic cell reprogramming by inducing epigenome modifications. PNAS Jul 19;108(29):11912-7

Cantone I, Marucci L, Iorio F, Ricci MA, Belcastro V, Bansal M, di Bernardo M, Santini D, *di Bernardo D and *Cosma MP (2009). A yeast synthetic network for In-vivo assessment of reverse-engineering and modelling approaches. Cell Apr 3;137(1):172-81. *co-last authors

Lluis F, Pedone E, Pepe S, Cosma MP (2008). Periodic activation of Wnt/beta-catenin signalling enhances somatic cell reprogramming mediated by cell fusion. Cell Stem Cell. Nov 6;3(5):493-507